miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|117374914|gb|EG704149.1|EG704149 GGTGGCTCACGCCTGTTTCCCAGCACTTTGGGAGGCCGAGGGGGGCGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCA
GGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATAAAAATGAGCCAGGCGTGGTGGCGGGCGCCTGTAA
TCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATCACTTGAACCCGAGAGGCAGGGGTTGCAGTGAGCCAAGATCACGCCA
TTGCACTCCAGCCTGGGGGACAAGAGCGAGACTTAGTCTGAAAGAAAAAAAAAAAATCAGGGATATAGTTCATATCCCAC
TTCTTTGTTTACACCAATGTCCCTGGATATCAGCCTGTAGCTAATGGACTTGGATTTCTGGTCTAAGTGGGCATCCTAGG
GATGGGGTGGAACACTGAGCTTCTAAGCCTCAATGTAGTGTAGAAAGGTGCTGGGGCCTGTCTGGCAAGCCTTGTTGAAA
TGCTCTGTCATTCAGTATTGCCTTAATAAACTTCACCCACAACTG




Most similar to sp|Q6UX73|CP089_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6UX73|CP089_HUMAN UPF0764 protein C16orf89 OS=Homo sapiens
           GN=C16orf89 PE=2 SV=2
          Length = 402

 Score =  109 bits (272), Expect = 1e-23
 Identities = 55/71 (77%), Positives = 58/71 (81%)
 Frame = -1

Query: 261 VPQAGVQWRDLGSLQPLPLGFK*FSCLSLPSSWDYRRPPPRLAHFYFFVFLVETGFHHVG 82
           V QAGVQWR+LGSLQPLP GFK FSCL LPSSWDYR  PP LA+FY  +FLVETGFHHV 
Sbjct: 323 VAQAGVQWRNLGSLQPLPPGFKQFSCLILPSSWDYRSVPPYLANFY--IFLVETGFHHVA 380

Query: 81  LAGLELLTSGD 49
            AGLELL S D
Sbjct: 381 HAGLELLISRD 391